Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HLA-A-209ENST00000638375 975 ntBASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 ITM2C-210ENST00000620962 501 ntBASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC162PA2VCL2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC162PA2VCL2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 RPPH1-201ENST00000516869 333 ntBASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC162PA2VCL2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AC141586.3-201ENST00000562166 1838 ntBASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AC018445.3-201ENST00000624177 1945 ntBASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AP000974.1-201ENST00000623909 2387 ntBASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 KRT18P29-201ENST00000397031 1267 ntBASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC162PA2VCL2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC162PA2VCL2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms