Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV27A0A0K0K1C4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 AC018470.1-201ENST00000624790 3129 ntBASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 CNN2P6-201ENST00000439038 900 ntBASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 AC008694.1-202ENST00000636953 945 ntBASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV27A0A0K0K1C4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 SDHAP1-207ENST00000440850 2000 ntBASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 AL355472.2-201ENST00000422958 438 ntBASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV27A0A0K0K1C4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 AC090340.1-201ENST00000620778 4980 ntBASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV27A0A0K0K1C4 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms