Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAV13-1A0A0B4J241 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT18P11-201ENST00000435214 1283 ntBASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 AC100791.3-201ENST00000617619 330 ntBASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAV13-1A0A0B4J241 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 FZD10-202ENST00000539839 3282 ntBASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV13-1A0A0B4J241 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV13-1A0A0B4J241 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms