Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 LINC01238-205ENST00000567549 1107 ntBASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 AC087388.1-201ENST00000571370 1112 ntBASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV19A0A0A6YYK7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 AC117947.1-201ENST00000427448 529 ntBASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 AC139887.4-201ENST00000607877 719 ntBASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 AC141257.4-201ENST00000634557 245 ntBASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 AC136944.6-201ENST00000634818 245 ntBASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV19A0A0A6YYK7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 COX11P1-201ENST00000489116 835 ntBASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 AC022616.7-201ENST00000525383 220 ntBASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 AP003041.3-201ENST00000527151 707 ntBASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAV19A0A0A6YYK7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 AC063952.2-201ENST00000498792 1227 ntBASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV19A0A0A6YYK7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV19A0A0A6YYK7 RNF152P1-201ENST00000397754 604 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms