Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ZNRF2P3-201ENST00000424200 374 ntBASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
TRAV8-1A0A0A6YYK1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 AC135050.7-201ENST00000624508 2218 ntBASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 KRT18P11-201ENST00000435214 1283 ntBASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CNN2P6-201ENST00000439038 900 ntBASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 C2orf69P4-201ENST00000565394 541 ntBASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 FP475955.4-201ENST00000623131 1990 ntBASIC14.64□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 AC090164.3-201ENST00000610780 2143 ntBASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV8-1A0A0A6YYK1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV8-1A0A0A6YYK1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms