Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AF186192.3-201ENST00000583427 947 ntBASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AL353708.3-201ENST00000610272 989 ntBASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 KRT17P2-201ENST00000300992 1314 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 NIFKP9-201ENST00000419265 221 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AP002982.1-201ENST00000492365 877 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MIR4785-201ENST00000585005 73 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AC116562.4-201ENST00000641316 2276 ntBASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AL160286.2-201ENST00000567150 934 ntBASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AL445675.2-201ENST00000620291 557 ntBASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 AC073912.3-201ENST00000624414 853 ntBASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 KSR1P1-201ENST00000446298 240 ntBASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFSF12-TNFSF13A0A0A6YY99 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms