Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-7A0A0A0MS04 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC141586.3-201ENST00000562166 1838 ntBASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 AF201337.1-201ENST00000520239 748 ntBASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 AL161938.1-201ENST00000569833 2180 ntBASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-7A0A0A0MS04 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF815P-204ENST00000434898 1737 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 BX276092.2-201ENST00000417668 665 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC105036.2-201ENST00000569468 176 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC005829.2-201ENST00000571422 1056 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC080038.1-201ENST00000611274 1154 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 AL031598.1-201ENST00000561511 1773 ntBASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-7A0A0A0MS04 TEX21P-204ENST00000641479 1693 ntBASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 WIZP1-201ENST00000531444 2299 ntBASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC073111.5-205ENST00000641717 521 ntBASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-7A0A0A0MS04 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 AC093525.10-201ENST00000625130 1569 ntBASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 AL050303.2-201ENST00000619798 666 ntBASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-7A0A0A0MS04 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms