Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC187A0A096LP49 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC187A0A096LP49 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC187A0A096LP49 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 CLEC4GP1-201ENST00000596555 870 ntBASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 AC083849.1-201ENST00000615227 514 ntBASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC187A0A096LP49 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 LINC01311-201ENST00000565162 1445 ntBASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 GCSHP2-201ENST00000560971 527 ntBASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC187A0A096LP49 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC187A0A096LP49 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms