Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 YBX1P1-201ENST00000445822 960 ntBASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 LTB4R2-202ENST00000528054 3092 ntBASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV18A0A075B6X5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 PCDHB18P-201ENST00000524813 2368 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 FP475955.4-201ENST00000623131 1990 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 KRT18P68-201ENST00000392293 1000 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 AL139246.5-201ENST00000606645 996 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 AC100791.3-201ENST00000617619 330 ntBASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV18A0A075B6X5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 AC018553.1-201ENST00000616682 1458 ntBASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV18A0A075B6X5 AC093525.10-201ENST00000625130 1569 ntBASIC16.55■□□□□ 0.24
TRAV18A0A075B6X5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV18A0A075B6X5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms