Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SYNPOQ8N3V7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SYNPOQ8N3V7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC006484.1-201ENST00000435086 1884 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC092447.10-201ENST00000620607 1652 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AL360270.2-201ENST00000562952 5985 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 Y_RNA.6-201ENST00000362350 114 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RNU6-263P-201ENST00000363811 107 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC019155.1-201ENST00000382242 574 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RNU6-339P-201ENST00000384310 107 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AL049693.1-201ENST00000402760 611 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 FCF1P9-201ENST00000412546 282 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 OR2B7P-201ENST00000429302 934 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 MTND1P4-201ENST00000435196 415 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 ARPC3P1-201ENST00000437218 533 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RPL5P25-201ENST00000441148 775 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 CEACAMP6-201ENST00000452007 574 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 MTND1P3-201ENST00000484956 952 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 OR5H5P-201ENST00000503164 928 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 COX7A2P2-201ENST00000505291 250 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RPL37P25-201ENST00000507308 276 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RAB9BP1-201ENST00000519581 626 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC022360.1-201ENST00000521058 340 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AP000769.2-201ENST00000602344 396 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC090578.1-201ENST00000604955 591 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC138749.5-201ENST00000611461 208 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AL049794.2-201ENST00000616301 365 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AC116165.2-201ENST00000616705 206 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 U73479.1-201ENST00000618062 168 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 OR5AK4P-201ENST00000635912 903 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 PABPC1P7-201ENST00000413177 1513 ntBASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SYNPOQ8N3V7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 Y_RNA.46-201ENST00000362695 102 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 RNA5SP258-201ENST00000362750 119 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 RNU6-248P-201ENST00000410720 107 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 RNU4-78P-201ENST00000410940 126 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 RNU6-195P-201ENST00000411352 109 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 BX295541.1-201ENST00000417774 250 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 RPS12P5-201ENST00000423449 371 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 MTCO3P30-201ENST00000426425 670 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 ISCA1P6-201ENST00000427740 390 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 AL136231.1-201ENST00000429407 730 ntBASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.27□□□□□ -1.57
SYNPOQ8N3V7 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms