Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RN7SL346P-201ENST00000491561 294 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 TTC39CP1-201ENST00000512513 755 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 snoU109.6-201ENST00000516831 118 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC090572.1-201ENST00000519251 160 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC107934.1-201ENST00000522215 217 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC018630.1-201ENST00000541376 925 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC126177.5-201ENST00000549599 178 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 NCAPGP2-201ENST00000557911 754 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 TXNP4-201ENST00000575018 310 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 LARP7P2-201ENST00000575306 125 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 7SK.7-201ENST00000603504 247 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC010680.4-201ENST00000605334 543 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC022893.2-201ENST00000564832 3296 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AP001541.1-201ENST00000623322 1904 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 OR9K1P-202ENST00000641111 3217 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RNU1-85P-201ENST00000364127 164 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-831P-201ENST00000384548 107 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 MT-TR-201ENST00000387439 65 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-308P-201ENST00000390957 107 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-1304P-201ENST00000411374 106 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC127526.1-201ENST00000417526 366 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 NUP35P1-201ENST00000422734 947 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AL731534.1-201ENST00000434711 269 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AL138799.3-201ENST00000438968 350 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC079781.2-201ENST00000446424 169 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC004980.3-201ENST00000447046 365 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 MEMO1P4-201ENST00000453590 386 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RN7SL447P-201ENST00000494711 245 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 SNRPCP2-201ENST00000504370 475 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC017037.1-201ENST00000508460 471 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.720-201ENST00000517166 92 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 SNORA25.17-201ENST00000517184 124 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC073916.1-201ENST00000545095 130 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 HSPE1P2-201ENST00000554777 306 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC110588.1-201ENST00000559699 137 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 TCL6_3.1-201ENST00000619064 137 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 AC132068.1-201ENST00000623805 459 ntBASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.28
ZC3H4Q9UPT8 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 KPNA2P2-201ENST00000419546 1489 ntBASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 AP004289.2-201ENST00000444413 1457 ntBASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 AC097504.1-201ENST00000515103 2415 ntBASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ZC3H4Q9UPT8 RNU6-1318P-201ENST00000365389 103 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU4-2-201ENST00000365668 141 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNU6-1106P-201ENST00000390845 107 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 RNY4P36-201ENST00000391116 96 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 CISD1P1-201ENST00000393907 327 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 EIF5P1-201ENST00000400019 1231 ntBASIC7.01□□□□□ -1.29
ZC3H4Q9UPT8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms