RNA–Protein interactions for RNA: ENST00000390957.1

RNU6-308P-201, Transcript of RNA, U6 small nuclear 308, pseudogene, humanhuman

BASIC

Gene RNU6-308P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-308P-201ENST00000390957 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
RNU6-308P-201ENST00000390957 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
RNU6-308P-201ENST00000390957 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
RNU6-308P-201ENST00000390957 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
RNU6-308P-201ENST00000390957 FOXD1Q16676 465 aa16.44■□□□□ 0.22
RNU6-308P-201ENST00000390957 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
RNU6-308P-201ENST00000390957 MSH5O43196 834 aa15.61■□□□□ 0.09
RNU6-308P-201ENST00000390957 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
RNU6-308P-201ENST00000390957 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
RNU6-308P-201ENST00000390957 ADRA2BP18089 450 aa15.22■□□□□ 0.03
RNU6-308P-201ENST00000390957 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
RNU6-308P-201ENST00000390957 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
RNU6-308P-201ENST00000390957 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
RNU6-308P-201ENST00000390957 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
RNU6-308P-201ENST00000390957 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
RNU6-308P-201ENST00000390957 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
RNU6-308P-201ENST00000390957 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
RNU6-308P-201ENST00000390957 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
RNU6-308P-201ENST00000390957 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
RNU6-308P-201ENST00000390957 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
RNU6-308P-201ENST00000390957 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
RNU6-308P-201ENST00000390957 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
RNU6-308P-201ENST00000390957 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
RNU6-308P-201ENST00000390957 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
RNU6-308P-201ENST00000390957 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
RNU6-308P-201ENST00000390957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
RNU6-308P-201ENST00000390957 KCNA4P22459 653 aa12.58□□□□□ -0.4
RNU6-308P-201ENST00000390957 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
RNU6-308P-201ENST00000390957 APLP2Q06481 763 aa12.49□□□□□ -0.41
RNU6-308P-201ENST00000390957 CAPN15O75808 1086 aa12.42□□□□□ -0.42
RNU6-308P-201ENST00000390957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
RNU6-308P-201ENST00000390957 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
RNU6-308P-201ENST00000390957 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
RNU6-308P-201ENST00000390957 DSG3P32926 999 aa12.32□□□□□ -0.44
RNU6-308P-201ENST00000390957 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
RNU6-308P-201ENST00000390957 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
RNU6-308P-201ENST00000390957 SAMD1Q6SPF0 538 aaPredicted RBP12.27□□□□□ -0.45
RNU6-308P-201ENST00000390957 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
RNU6-308P-201ENST00000390957 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
RNU6-308P-201ENST00000390957 ABCB7O75027 752 aa12.04□□□□□ -0.48
RNU6-308P-201ENST00000390957 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
RNU6-308P-201ENST00000390957 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
RNU6-308P-201ENST00000390957 POTEHQ6S545 545 aa11.93□□□□□ -0.5
RNU6-308P-201ENST00000390957 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
RNU6-308P-201ENST00000390957 POLA2Q14181 598 aa11.83□□□□□ -0.52
RNU6-308P-201ENST00000390957 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
RNU6-308P-201ENST00000390957 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
RNU6-308P-201ENST00000390957 CHRDL2Q6WN34 429 aa11.58□□□□□ -0.56
RNU6-308P-201ENST00000390957 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
RNU6-308P-201ENST00000390957 ATF5Q9Y2D1 282 aaPredicted RBP11.58□□□□□ -0.56
RNU6-308P-201ENST00000390957 ZBTB22O15209 634 aa11.49□□□□□ -0.57
RNU6-308P-201ENST00000390957 OSCARQ8IYS5 282 aa11.44□□□□□ -0.58
RNU6-308P-201ENST00000390957 FBLN2P98095 1184 aa11.42□□□□□ -0.58
RNU6-308P-201ENST00000390957 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
RNU6-308P-201ENST00000390957 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
RNU6-308P-201ENST00000390957 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
RNU6-308P-201ENST00000390957 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
RNU6-308P-201ENST00000390957 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
RNU6-308P-201ENST00000390957 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
RNU6-308P-201ENST00000390957 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
RNU6-308P-201ENST00000390957 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
RNU6-308P-201ENST00000390957 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
RNU6-308P-201ENST00000390957 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
RNU6-308P-201ENST00000390957 HAX1O00165 279 aa11.1□□□□□ -0.63
RNU6-308P-201ENST00000390957 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
RNU6-308P-201ENST00000390957 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
RNU6-308P-201ENST00000390957 CLEC11AQ9Y240 323 aa11.05□□□□□ -0.64
RNU6-308P-201ENST00000390957 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
RNU6-308P-201ENST00000390957 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
RNU6-308P-201ENST00000390957 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
RNU6-308P-201ENST00000390957 PRR29P0C7W0 189 aa10.91□□□□□ -0.66
RNU6-308P-201ENST00000390957 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
RNU6-308P-201ENST00000390957 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
RNU6-308P-201ENST00000390957 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
RNU6-308P-201ENST00000390957 EVX2Q03828 476 aa10.77□□□□□ -0.69
RNU6-308P-201ENST00000390957 CHADLQ6NUI6 762 aa10.75□□□□□ -0.69
RNU6-308P-201ENST00000390957 CLCN6P51797 869 aa10.73□□□□□ -0.69
RNU6-308P-201ENST00000390957 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
RNU6-308P-201ENST00000390957 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
RNU6-308P-201ENST00000390957 GABBR2O75899 941 aa10.66□□□□□ -0.7
RNU6-308P-201ENST00000390957 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
RNU6-308P-201ENST00000390957 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
RNU6-308P-201ENST00000390957 CREBZFQ9NS37 354 aa10.52□□□□□ -0.73
RNU6-308P-201ENST00000390957 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
RNU6-308P-201ENST00000390957 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
RNU6-308P-201ENST00000390957 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
RNU6-308P-201ENST00000390957 LHX8Q68G74 356 aa10.47□□□□□ -0.73
RNU6-308P-201ENST00000390957 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
RNU6-308P-201ENST00000390957 PLEKHG5O94827 1062 aa10.38□□□□□ -0.75
RNU6-308P-201ENST00000390957 PROM2Q8N271 834 aa10.37□□□□□ -0.75
RNU6-308P-201ENST00000390957 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
RNU6-308P-201ENST00000390957 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
RNU6-308P-201ENST00000390957 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
RNU6-308P-201ENST00000390957 PHF12Q96QT6 1004 aa10.25□□□□□ -0.77
RNU6-308P-201ENST00000390957 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
RNU6-308P-201ENST00000390957 MIER1Q8N108 512 aa10.19□□□□□ -0.78
RNU6-308P-201ENST00000390957 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
RNU6-308P-201ENST00000390957 ASTLQ6HA08 431 aaPredicted RBP10.14□□□□□ -0.79
RNU6-308P-201ENST00000390957 SLC39A7Q92504 469 aa10.14□□□□□ -0.79
RNU6-308P-201ENST00000390957 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms