Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 TATDN2P3-201ENST00000452855 3665 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MAPK10-338ENST00000641647 3362 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 PPIAP24-201ENST00000328558 471 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RNA5SP448-201ENST00000363151 111 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-937P-201ENST00000384325 106 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.504-201ENST00000384481 104 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-1179P-201ENST00000384667 107 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-959P-201ENST00000384671 107 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-1055P-201ENST00000391085 107 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC092952.1-201ENST00000397646 1209 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.590-201ENST00000410140 107 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AL355862.1-201ENST00000412705 353 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 CRIP1P3-201ENST00000416794 220 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL587P-201ENST00000459853 281 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 HMGB1P25-201ENST00000468402 607 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RPS18P6-201ENST00000476880 458 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 CEACAMP3-202ENST00000483806 638 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ACTG1P20-201ENST00000486001 468 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC006070.1-201ENST00000508151 193 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 HMGN1P11-201ENST00000508668 303 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORD116-28-201ENST00000516123 91 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.679-201ENST00000516416 91 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.706-201ENST00000516933 99 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORA31.18-201ENST00000517043 134 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORA70.23-201ENST00000517218 151 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MRPS18CP4-201ENST00000535821 231 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SRMP2-201ENST00000553832 916 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RPL21P7-201ENST00000557463 483 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL835P-201ENST00000579920 262 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC008555.7-201ENST00000605008 583 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC034102.8-201ENST00000615146 484 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC240442.1-201ENST00000616055 283 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 uc_338.21-201ENST00000622458 147 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MTND1P7-201ENST00000632801 297 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 HLA-B-257ENST00000640094 147 ntBASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRTAP3-1Q9BYR8 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms