Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 VN1R10P-201ENST00000447106 875 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 MTCO3P2-201ENST00000457365 171 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP88Q99567 HSPE1P23-201ENST00000509838 286 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP88Q99567 RNU6-583P-201ENST00000516012 92 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 RNA5SP464-201ENST00000516251 108 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP88Q99567 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP88Q99567 AP000790.1-201ENST00000528891 737 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC008127.2-201ENST00000549925 1075 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP88Q99567 SULT1C2P1-202ENST00000562418 459 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 MIR4512-201ENST00000583257 77 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AL590229.1-201ENST00000603497 542 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 ARF4P1-201ENST00000605447 541 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP88Q99567 AC114781.5-201ENST00000615297 108 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC068831.8-201ENST00000620171 435 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AC008443.7-201ENST00000622195 246 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 AP000843.1-201ENST00000624880 701 ntBASIC5.25□□□□□ -1.57
NUP88Q99567 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP88Q99567 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP88Q99567 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NUP88Q99567 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC011477.1-204ENST00000623416 1325 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC008033.1-201ENST00000216407 1162 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 AL512430.2-201ENST00000406786 339 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AL450338.1-201ENST00000407987 512 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC073264.1-201ENST00000411508 416 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AL139095.3-201ENST00000419672 1203 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC093698.1-201ENST00000423843 571 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 COX6CP15-201ENST00000426313 211 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.24□□□□□ -1.57
NUP88Q99567 AL035407.1-201ENST00000429211 571 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 CEACAMP1-201ENST00000434624 1035 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 RPS3AP54-201ENST00000435535 734 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.24□□□□□ -1.57
NUP88Q99567 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.24□□□□□ -1.57
NUP88Q99567 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 PTMAP3-201ENST00000447474 330 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.24□□□□□ -1.57
NUP88Q99567 NUTF2P7-201ENST00000453086 375 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 RPL18AP17-201ENST00000455326 198 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 RPL30P6-201ENST00000475925 342 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC082651.2-201ENST00000496833 166 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 OR5BM1P-201ENST00000512021 366 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 AP000827.1-201ENST00000527814 258 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 OR4A12P-201ENST00000530847 918 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 CYCSP28-201ENST00000534284 321 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.24□□□□□ -1.57
NUP88Q99567 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC004223.2-201ENST00000590309 544 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC015726.1-201ENST00000602353 681 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC020910.2-201ENST00000603635 610 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC018714.1-201ENST00000605028 208 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 COX6CP4-201ENST00000605798 228 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC243773.3-201ENST00000613270 256 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC068722.2-201ENST00000618734 544 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 AC079228.1-201ENST00000624774 1049 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 AC026951.1-201ENST00000559530 2459 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 MTND5P28-201ENST00000438005 1594 ntBASIC5.24□□□□□ -1.57
NUP88Q99567 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
NUP88Q99567 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP88Q99567 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP88Q99567 CPHL1P-201ENST00000461341 3407 ntBASIC5.23□□□□□ -1.57
NUP88Q99567 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP88Q99567 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP88Q99567 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP88Q99567 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NUP88Q99567 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms