RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
CYCSP28-201ENST00000534284 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
CYCSP28-201ENST00000534284 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
CYCSP28-201ENST00000534284 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
CYCSP28-201ENST00000534284 FOXD1Q16676 465 aa14.4□□□□□ -0.1
CYCSP28-201ENST00000534284 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
CYCSP28-201ENST00000534284 MSH5O43196 834 aa13.46□□□□□ -0.25
CYCSP28-201ENST00000534284 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
CYCSP28-201ENST00000534284 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
CYCSP28-201ENST00000534284 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
CYCSP28-201ENST00000534284 ADRA2BP18089 450 aa13.23□□□□□ -0.29
CYCSP28-201ENST00000534284 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
CYCSP28-201ENST00000534284 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
CYCSP28-201ENST00000534284 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
CYCSP28-201ENST00000534284 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
CYCSP28-201ENST00000534284 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
CYCSP28-201ENST00000534284 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
CYCSP28-201ENST00000534284 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
CYCSP28-201ENST00000534284 KCNA4P22459 653 aa11.57□□□□□ -0.56
CYCSP28-201ENST00000534284 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
CYCSP28-201ENST00000534284 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
CYCSP28-201ENST00000534284 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
CYCSP28-201ENST00000534284 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
CYCSP28-201ENST00000534284 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
CYCSP28-201ENST00000534284 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
CYCSP28-201ENST00000534284 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
CYCSP28-201ENST00000534284 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
CYCSP28-201ENST00000534284 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
CYCSP28-201ENST00000534284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
CYCSP28-201ENST00000534284 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
CYCSP28-201ENST00000534284 U3KPZ7 1027 aaPredicted RBP10.82□□□□□ -0.68
CYCSP28-201ENST00000534284 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
CYCSP28-201ENST00000534284 DSG3P32926 999 aa10.72□□□□□ -0.69
CYCSP28-201ENST00000534284 CAPN15O75808 1086 aa10.67□□□□□ -0.7
CYCSP28-201ENST00000534284 POTEHQ6S545 545 aa10.64□□□□□ -0.71
CYCSP28-201ENST00000534284 ZBTB22O15209 634 aa10.62□□□□□ -0.71
CYCSP28-201ENST00000534284 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
CYCSP28-201ENST00000534284 FOXD4L1Q9NU39 408 aa10.51□□□□□ -0.73
CYCSP28-201ENST00000534284 ABCB7O75027 752 aa10.46□□□□□ -0.73
CYCSP28-201ENST00000534284 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
CYCSP28-201ENST00000534284 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
CYCSP28-201ENST00000534284 APLP2Q06481 763 aa10.31□□□□□ -0.76
CYCSP28-201ENST00000534284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
CYCSP28-201ENST00000534284 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
CYCSP28-201ENST00000534284 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
CYCSP28-201ENST00000534284 POLA2Q14181 598 aa10.14□□□□□ -0.79
CYCSP28-201ENST00000534284 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
CYCSP28-201ENST00000534284 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
CYCSP28-201ENST00000534284 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
CYCSP28-201ENST00000534284 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
CYCSP28-201ENST00000534284 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
CYCSP28-201ENST00000534284 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
CYCSP28-201ENST00000534284 FKBP8Q14318 412 aa10.02□□□□□ -0.81
CYCSP28-201ENST00000534284 ATF5Q9Y2D1 282 aaPredicted RBP10.02□□□□□ -0.81
CYCSP28-201ENST00000534284 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
CYCSP28-201ENST00000534284 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CYCSP28-201ENST00000534284 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
CYCSP28-201ENST00000534284 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
CYCSP28-201ENST00000534284 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
CYCSP28-201ENST00000534284 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
CYCSP28-201ENST00000534284 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
CYCSP28-201ENST00000534284 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
CYCSP28-201ENST00000534284 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
CYCSP28-201ENST00000534284 HAX1O00165 279 aa9.68□□□□□ -0.86
CYCSP28-201ENST00000534284 EVX2Q03828 476 aa9.66□□□□□ -0.86
CYCSP28-201ENST00000534284 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
CYCSP28-201ENST00000534284 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
CYCSP28-201ENST00000534284 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 FBLN2P98095 1184 aa9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CYCSP28-201ENST00000534284 NISCHQ9Y2I1 1504 aa9.44□□□□□ -0.9
CYCSP28-201ENST00000534284 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
CYCSP28-201ENST00000534284 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
CYCSP28-201ENST00000534284 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
CYCSP28-201ENST00000534284 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
CYCSP28-201ENST00000534284 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CYCSP28-201ENST00000534284 GABBR2O75899 941 aa9.35□□□□□ -0.91
CYCSP28-201ENST00000534284 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
CYCSP28-201ENST00000534284 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
CYCSP28-201ENST00000534284 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
CYCSP28-201ENST00000534284 PABPN1Q86U42 306 aaKnown RBP eCLIP9.26□□□□□ -0.93
CYCSP28-201ENST00000534284 PROM2Q8N271 834 aa9.26□□□□□ -0.93
CYCSP28-201ENST00000534284 LHX8Q68G74 356 aa9.24□□□□□ -0.93
CYCSP28-201ENST00000534284 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
CYCSP28-201ENST00000534284 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
CYCSP28-201ENST00000534284 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
CYCSP28-201ENST00000534284 FARP1Q9Y4F1 1045 aaPredicted RBP9.14□□□□□ -0.95
CYCSP28-201ENST00000534284 PKD2Q13563 968 aa9.11□□□□□ -0.95
CYCSP28-201ENST00000534284 SPOCK2Q92563 424 aa9.07□□□□□ -0.96
CYCSP28-201ENST00000534284 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 BCANQ96GW7 911 aa9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms