RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 AEBP2Q6ZN18 517 aaPredicted RBP18.07■□□□□ 0.48
CYCSP28-201ENST00000534284 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
CYCSP28-201ENST00000534284 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
CYCSP28-201ENST00000534284 PHF23Q9BUL5 403 aaPredicted RBP15.15■□□□□ 0.02
CYCSP28-201ENST00000534284 FOXD1Q16676 465 aa14.4□□□□□ -0.1
CYCSP28-201ENST00000534284 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
CYCSP28-201ENST00000534284 MSH5O43196 834 aa13.46□□□□□ -0.25
CYCSP28-201ENST00000534284 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
CYCSP28-201ENST00000534284 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
CYCSP28-201ENST00000534284 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
CYCSP28-201ENST00000534284 ADRA2BP18089 450 aa13.23□□□□□ -0.29
CYCSP28-201ENST00000534284 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
CYCSP28-201ENST00000534284 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
CYCSP28-201ENST00000534284 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
CYCSP28-201ENST00000534284 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
CYCSP28-201ENST00000534284 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
CYCSP28-201ENST00000534284 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
CYCSP28-201ENST00000534284 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
CYCSP28-201ENST00000534284 KCNA4P22459 653 aa11.57□□□□□ -0.56
CYCSP28-201ENST00000534284 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
CYCSP28-201ENST00000534284 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
CYCSP28-201ENST00000534284 CNKSR2Q8WXI2 1034 aa11.45□□□□□ -0.58
CYCSP28-201ENST00000534284 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
CYCSP28-201ENST00000534284 C1QBPQ07021 282 aaKnown RBP11.29□□□□□ -0.6
CYCSP28-201ENST00000534284 DNAJC5BQ9UF47 199 aa11.19□□□□□ -0.62
CYCSP28-201ENST00000534284 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
CYCSP28-201ENST00000534284 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
CYCSP28-201ENST00000534284 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
CYCSP28-201ENST00000534284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
CYCSP28-201ENST00000534284 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
CYCSP28-201ENST00000534284 U3KPZ7 1027 aaPredicted RBP10.82□□□□□ -0.68
CYCSP28-201ENST00000534284 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
CYCSP28-201ENST00000534284 DSG3P32926 999 aa10.72□□□□□ -0.69
CYCSP28-201ENST00000534284 CAPN15O75808 1086 aa10.67□□□□□ -0.7
CYCSP28-201ENST00000534284 POTEHQ6S545 545 aa10.64□□□□□ -0.71
CYCSP28-201ENST00000534284 ZBTB22O15209 634 aa10.62□□□□□ -0.71
CYCSP28-201ENST00000534284 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
CYCSP28-201ENST00000534284 FOXD4L1Q9NU39 408 aa10.51□□□□□ -0.73
CYCSP28-201ENST00000534284 ABCB7O75027 752 aa10.46□□□□□ -0.73
CYCSP28-201ENST00000534284 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
CYCSP28-201ENST00000534284 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
CYCSP28-201ENST00000534284 APLP2Q06481 763 aa10.31□□□□□ -0.76
CYCSP28-201ENST00000534284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
CYCSP28-201ENST00000534284 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
CYCSP28-201ENST00000534284 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
CYCSP28-201ENST00000534284 POLA2Q14181 598 aa10.14□□□□□ -0.79
CYCSP28-201ENST00000534284 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
CYCSP28-201ENST00000534284 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
CYCSP28-201ENST00000534284 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
CYCSP28-201ENST00000534284 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
CYCSP28-201ENST00000534284 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
CYCSP28-201ENST00000534284 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
CYCSP28-201ENST00000534284 FKBP8Q14318 412 aa10.02□□□□□ -0.81
CYCSP28-201ENST00000534284 ATF5Q9Y2D1 282 aaPredicted RBP10.02□□□□□ -0.81
CYCSP28-201ENST00000534284 SLC24A1O60721 1099 aa10.01□□□□□ -0.81
CYCSP28-201ENST00000534284 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CYCSP28-201ENST00000534284 REM2Q8IYK8 340 aaPredicted RBP9.84□□□□□ -0.83
CYCSP28-201ENST00000534284 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
CYCSP28-201ENST00000534284 OSCARQ8IYS5 282 aa9.82□□□□□ -0.84
CYCSP28-201ENST00000534284 PIP4P2Q8N4L2 257 aa9.81□□□□□ -0.84
CYCSP28-201ENST00000534284 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
CYCSP28-201ENST00000534284 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
CYCSP28-201ENST00000534284 FXR2P51116 673 aaKnown RBP eCLIP9.71□□□□□ -0.86
CYCSP28-201ENST00000534284 HAX1O00165 279 aa9.68□□□□□ -0.86
CYCSP28-201ENST00000534284 EVX2Q03828 476 aa9.66□□□□□ -0.86
CYCSP28-201ENST00000534284 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
CYCSP28-201ENST00000534284 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
CYCSP28-201ENST00000534284 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
CYCSP28-201ENST00000534284 SPDYE4A6NLX3 237 aa9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 FBLN2P98095 1184 aa9.47□□□□□ -0.89
CYCSP28-201ENST00000534284 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CYCSP28-201ENST00000534284 NISCHQ9Y2I1 1504 aa9.44□□□□□ -0.9
CYCSP28-201ENST00000534284 SSUH2Q9Y2M2 353 aa9.42□□□□□ -0.9
CYCSP28-201ENST00000534284 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
CYCSP28-201ENST00000534284 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
CYCSP28-201ENST00000534284 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
CYCSP28-201ENST00000534284 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CYCSP28-201ENST00000534284 GABBR2O75899 941 aa9.35□□□□□ -0.91
CYCSP28-201ENST00000534284 DCAF8L2P0C7V8 631 aa9.34□□□□□ -0.91
CYCSP28-201ENST00000534284 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
CYCSP28-201ENST00000534284 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
CYCSP28-201ENST00000534284 PABPN1Q86U42 306 aaKnown RBP eCLIP9.26□□□□□ -0.93
CYCSP28-201ENST00000534284 PROM2Q8N271 834 aa9.26□□□□□ -0.93
CYCSP28-201ENST00000534284 LHX8Q68G74 356 aa9.24□□□□□ -0.93
CYCSP28-201ENST00000534284 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 IFNLR1Q8IU57 520 aaPredicted RBP9.23□□□□□ -0.93
CYCSP28-201ENST00000534284 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
CYCSP28-201ENST00000534284 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
CYCSP28-201ENST00000534284 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
CYCSP28-201ENST00000534284 FARP1Q9Y4F1 1045 aaPredicted RBP9.14□□□□□ -0.95
CYCSP28-201ENST00000534284 PKD2Q13563 968 aa9.11□□□□□ -0.95
CYCSP28-201ENST00000534284 SPOCK2Q92563 424 aa9.07□□□□□ -0.96
CYCSP28-201ENST00000534284 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 BCANQ96GW7 911 aa9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
CYCSP28-201ENST00000534284 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms