Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 UBBP1-201ENST00000392399 473 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 RN7SKP296-201ENST00000411185 341 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.89□□□□□ -1.31
COL9A1P20849 RPL23AP25-201ENST00000430973 463 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.89□□□□□ -1.31
COL9A1P20849 PFN1P11-201ENST00000445829 389 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.89□□□□□ -1.31
COL9A1P20849 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 RNU7-138P-201ENST00000459479 64 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 RN7SL870P-201ENST00000460111 296 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 AP000942.1-201ENST00000463969 747 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 AP000797.2-201ENST00000475768 606 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 RPL7P23-201ENST00000493874 747 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 RNU6-1338P-201ENST00000516328 91 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.89□□□□□ -1.31
COL9A1P20849 CYCSP25-201ENST00000525280 316 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 CBX3P8-201ENST00000532412 525 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.89□□□□□ -1.31
COL9A1P20849 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.89□□□□□ -1.31
COL9A1P20849 AC026956.1-201ENST00000558741 396 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 MIR4273-201ENST00000582824 84 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.89□□□□□ -1.31
COL9A1P20849 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 AL512652.1-201ENST00000619006 500 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 SNORA16A-202ENST00000628458 135 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.89□□□□□ -1.31
COL9A1P20849 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL9A1P20849 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.89□□□□□ -1.31
COL9A1P20849 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.89□□□□□ -1.31
COL9A1P20849 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
COL9A1P20849 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL9A1P20849 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL9A1P20849 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL9A1P20849 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.89□□□□□ -1.31
COL9A1P20849 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.89□□□□□ -1.31
COL9A1P20849 AKAP17BP-201ENST00000431706 2719 ntBASIC6.89□□□□□ -1.31
COL9A1P20849 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 AC092724.1-201ENST00000624623 3397 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
COL9A1P20849 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 snoU2_19.2-201ENST00000363024 80 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.88□□□□□ -1.31
COL9A1P20849 RNU6-946P-201ENST00000383878 107 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 SNORA51.9-201ENST00000384295 124 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 RNU6-22P-201ENST00000384355 107 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.88□□□□□ -1.31
COL9A1P20849 AC093106.2-201ENST00000428212 385 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AC239367.3-201ENST00000428996 814 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 RBMY2TP-201ENST00000451162 947 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AZGP1P2-201ENST00000454506 345 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AC018437.1-201ENST00000492214 406 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.88□□□□□ -1.31
COL9A1P20849 SNRPCP6-201ENST00000528310 210 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.88□□□□□ -1.31
COL9A1P20849 RPL23AP84-201ENST00000571193 464 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AC072026.1-201ENST00000605023 201 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AL591516.1-201ENST00000611326 274 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL9A1P20849 LINC01963-201ENST00000562038 3148 ntBASIC6.88□□□□□ -1.31
COL9A1P20849 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL9A1P20849 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL9A1P20849 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.88□□□□□ -1.31
COL9A1P20849 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
COL9A1P20849 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.88□□□□□ -1.31
COL9A1P20849 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL9A1P20849 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL9A1P20849 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL9A1P20849 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL9A1P20849 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.87□□□□□ -1.31
COL9A1P20849 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL9A1P20849 Z99129.4-201ENST00000624649 2435 ntBASIC6.87□□□□□ -1.31
COL9A1P20849 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms