RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
RNU6-1338P-201ENST00000516328 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
RNU6-1338P-201ENST00000516328 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
RNU6-1338P-201ENST00000516328 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
RNU6-1338P-201ENST00000516328 FOXD1Q16676 465 aa13.65□□□□□ -0.22
RNU6-1338P-201ENST00000516328 PLPPR3Q6T4P5 718 aa12.94□□□□□ -0.34
RNU6-1338P-201ENST00000516328 MSH5O43196 834 aa12.81□□□□□ -0.36
RNU6-1338P-201ENST00000516328 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
RNU6-1338P-201ENST00000516328 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
RNU6-1338P-201ENST00000516328 ADRA2BP18089 450 aa12.65□□□□□ -0.38
RNU6-1338P-201ENST00000516328 POTEDQ86YR6 584 aa12.62□□□□□ -0.39
RNU6-1338P-201ENST00000516328 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
RNU6-1338P-201ENST00000516328 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
RNU6-1338P-201ENST00000516328 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
RNU6-1338P-201ENST00000516328 PPP4R3CPQ6ZMV5 832 aa11.33□□□□□ -0.6
RNU6-1338P-201ENST00000516328 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
RNU6-1338P-201ENST00000516328 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
RNU6-1338P-201ENST00000516328 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
RNU6-1338P-201ENST00000516328 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
RNU6-1338P-201ENST00000516328 CACNB1Q02641 598 aaPredicted RBP11.04□□□□□ -0.64
RNU6-1338P-201ENST00000516328 RNF39Q9H2S5 420 aa10.91□□□□□ -0.66
RNU6-1338P-201ENST00000516328 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
RNU6-1338P-201ENST00000516328 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
RNU6-1338P-201ENST00000516328 C1QBPQ07021 282 aaKnown RBP10.75□□□□□ -0.69
RNU6-1338P-201ENST00000516328 NPM3O75607 178 aaKnown RBP10.71□□□□□ -0.69
RNU6-1338P-201ENST00000516328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
RNU6-1338P-201ENST00000516328 KCNA4P22459 653 aa10.43□□□□□ -0.74
RNU6-1338P-201ENST00000516328 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
RNU6-1338P-201ENST00000516328 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
RNU6-1338P-201ENST00000516328 CAPN15O75808 1086 aa10.25□□□□□ -0.77
RNU6-1338P-201ENST00000516328 SLC4A2P04920 1241 aa10.24□□□□□ -0.77
RNU6-1338P-201ENST00000516328 DSG3P32926 999 aa10.2□□□□□ -0.78
RNU6-1338P-201ENST00000516328 APLP2Q06481 763 aa10.1□□□□□ -0.79
RNU6-1338P-201ENST00000516328 TRHP20396 242 aaPredicted RBP10.08□□□□□ -0.8
RNU6-1338P-201ENST00000516328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
RNU6-1338P-201ENST00000516328 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
RNU6-1338P-201ENST00000516328 ZNF219Q9P2Y4 722 aaPredicted RBP10.05□□□□□ -0.8
RNU6-1338P-201ENST00000516328 ABCB7O75027 752 aa10.01□□□□□ -0.81
RNU6-1338P-201ENST00000516328 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1338P-201ENST00000516328 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
RNU6-1338P-201ENST00000516328 POTEHQ6S545 545 aa9.88□□□□□ -0.83
RNU6-1338P-201ENST00000516328 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
RNU6-1338P-201ENST00000516328 POLA2Q14181 598 aa9.78□□□□□ -0.84
RNU6-1338P-201ENST00000516328 FOXD4L1Q9NU39 408 aa9.78□□□□□ -0.84
RNU6-1338P-201ENST00000516328 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
RNU6-1338P-201ENST00000516328 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
RNU6-1338P-201ENST00000516328 ZBTB22O15209 634 aa9.58□□□□□ -0.88
RNU6-1338P-201ENST00000516328 ZBTB12Q9Y330 459 aaPredicted RBP9.57□□□□□ -0.88
RNU6-1338P-201ENST00000516328 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
RNU6-1338P-201ENST00000516328 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
RNU6-1338P-201ENST00000516328 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
RNU6-1338P-201ENST00000516328 ATXN8OSP0DMR3 200 aa9.47□□□□□ -0.89
RNU6-1338P-201ENST00000516328 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1338P-201ENST00000516328 FBLN2P98095 1184 aa9.32□□□□□ -0.92
RNU6-1338P-201ENST00000516328 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
RNU6-1338P-201ENST00000516328 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
RNU6-1338P-201ENST00000516328 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
RNU6-1338P-201ENST00000516328 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
RNU6-1338P-201ENST00000516328 SPDYE2Q495Y8 402 aa9.27□□□□□ -0.93
RNU6-1338P-201ENST00000516328 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU6-1338P-201ENST00000516328 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
RNU6-1338P-201ENST00000516328 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
RNU6-1338P-201ENST00000516328 HAX1O00165 279 aa9.16□□□□□ -0.94
RNU6-1338P-201ENST00000516328 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
RNU6-1338P-201ENST00000516328 CLEC11AQ9Y240 323 aa9.14□□□□□ -0.95
RNU6-1338P-201ENST00000516328 SSUH2Q9Y2M2 353 aa9.14□□□□□ -0.95
RNU6-1338P-201ENST00000516328 SPDYE1Q8NFV5 336 aaPredicted RBP9.13□□□□□ -0.95
RNU6-1338P-201ENST00000516328 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
RNU6-1338P-201ENST00000516328 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
RNU6-1338P-201ENST00000516328 EVX2Q03828 476 aa9.03□□□□□ -0.96
RNU6-1338P-201ENST00000516328 PABPN1Q86U42 306 aaKnown RBP eCLIP9.02□□□□□ -0.97
RNU6-1338P-201ENST00000516328 PRR29P0C7W0 189 aa8.97□□□□□ -0.97
RNU6-1338P-201ENST00000516328 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
RNU6-1338P-201ENST00000516328 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
RNU6-1338P-201ENST00000516328 EHMT2Q96KQ7 1210 aa8.95□□□□□ -0.98
RNU6-1338P-201ENST00000516328 GABBR2O75899 941 aa8.84□□□□□ -0.99
RNU6-1338P-201ENST00000516328 FARP1Q9Y4F1 1045 aaPredicted RBP8.81□□□□□ -1
RNU6-1338P-201ENST00000516328 CD44P16070 742 aaKnown RBP8.78□□□□□ -1
RNU6-1338P-201ENST00000516328 SPDYE4A6NLX3 237 aa8.77□□□□□ -1.01
RNU6-1338P-201ENST00000516328 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
RNU6-1338P-201ENST00000516328 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
RNU6-1338P-201ENST00000516328 CLCN6P51797 869 aa8.68□□□□□ -1.02
RNU6-1338P-201ENST00000516328 LHX8Q68G74 356 aa8.66□□□□□ -1.02
RNU6-1338P-201ENST00000516328 POTEIP0CG38 1075 aa8.65□□□□□ -1.02
RNU6-1338P-201ENST00000516328 ZRANB1Q9UGI0 708 aa8.65□□□□□ -1.02
RNU6-1338P-201ENST00000516328 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
RNU6-1338P-201ENST00000516328 DCBLD2Q96PD2 775 aa8.59□□□□□ -1.03
RNU6-1338P-201ENST00000516328 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
RNU6-1338P-201ENST00000516328 NPM1P06748 294 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNU6-1338P-201ENST00000516328 GALR2O43603 387 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1338P-201ENST00000516328 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1338P-201ENST00000516328 PROM2Q8N271 834 aa8.53□□□□□ -1.04
RNU6-1338P-201ENST00000516328 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
RNU6-1338P-201ENST00000516328 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
RNU6-1338P-201ENST00000516328 TSPYL2Q9H2G4 693 aaPredicted RBP8.41□□□□□ -1.06
RNU6-1338P-201ENST00000516328 PLEKHG5O94827 1062 aa8.39□□□□□ -1.07
RNU6-1338P-201ENST00000516328 PELP1Q8IZL8 1130 aaKnown RBP8.38□□□□□ -1.07
RNU6-1338P-201ENST00000516328 MIER1Q8N108 512 aa8.37□□□□□ -1.07
RNU6-1338P-201ENST00000516328 CCDC61Q9Y6R9 512 aa8.37□□□□□ -1.07
RNU6-1338P-201ENST00000516328 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms