Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 HMGB1P51-201ENST00000605166 638 ntBASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 AC022149.2-201ENST00000621061 203 ntBASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CRLF3Q8IUI8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 RNU1-75P-201ENST00000347264 129 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 RNA5SP167-201ENST00000365461 116 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 MIR200C-201ENST00000384980 68 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 RNA5SP171-201ENST00000391071 115 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 SOD2P1-201ENST00000396543 562 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 U3.39-201ENST00000408569 239 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 MTND4P22-201ENST00000413116 1169 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC004987.3-201ENST00000413879 771 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 RPS15AP6-201ENST00000420703 385 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL138799.3-201ENST00000438968 350 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL645931.1-201ENST00000439737 410 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 VN1R34P-201ENST00000447387 883 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 RPL12P26-201ENST00000452430 487 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC091564.1-201ENST00000464563 479 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 PTP4A1P6-201ENST00000531034 478 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC115085.1-201ENST00000588924 229 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 BNIP3P33-201ENST00000598912 569 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LLPHP1-201ENST00000603571 367 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC006077.1-201ENST00000604746 343 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 AC105429.2-201ENST00000610567 517 ntBASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.55□□□□□ -1.84
CRLF3Q8IUI8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AL161912.2-201ENST00000565707 3007 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 SYT14P1-202ENST00000600441 1448 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 MIR153-1-201ENST00000384914 90 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 HMGB3P18-201ENST00000406327 590 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 ARL5AP3-201ENST00000439327 386 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AC078817.1-201ENST00000492623 435 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 FABP5P12-201ENST00000515543 389 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 RNU6-1004P-201ENST00000516584 111 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 PAICSP4-201ENST00000517543 1253 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 DUXAP6-201ENST00000553858 601 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 MIR4444-1-201ENST00000581696 74 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 MIR4444-2-201ENST00000584390 74 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AC069304.3-201ENST00000603938 1084 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AL391497.1-201ENST00000608671 547 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 AC110801.1-201ENST00000623590 212 ntBASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CRLF3Q8IUI8 NMD3P1-201ENST00000439704 1488 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms