RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 AEBP2Q6ZN18 517 aaPredicted RBP14.39□□□□□ -0.11
LINC00649-204ENST00000593977 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
LINC00649-204ENST00000593977 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
LINC00649-204ENST00000593977 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
LINC00649-204ENST00000593977 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
LINC00649-204ENST00000593977 FOXD1Q16676 465 aa11.63□□□□□ -0.55
LINC00649-204ENST00000593977 MSH5O43196 834 aa11.19□□□□□ -0.62
LINC00649-204ENST00000593977 PLPPR3Q6T4P5 718 aa11.04□□□□□ -0.64
LINC00649-204ENST00000593977 PIAS4Q8N2W9 510 aaPredicted RBP10.73□□□□□ -0.69
LINC00649-204ENST00000593977 PPP6R1Q9UPN7 881 aa10.37□□□□□ -0.75
LINC00649-204ENST00000593977 ADRA2BP18089 450 aa10.3□□□□□ -0.76
LINC00649-204ENST00000593977 KCNA4P22459 653 aa10.1□□□□□ -0.79
LINC00649-204ENST00000593977 EHMT2Q96KQ7 1210 aa10.02□□□□□ -0.81
LINC00649-204ENST00000593977 CACNB1Q02641 598 aaPredicted RBP9.98□□□□□ -0.81
LINC00649-204ENST00000593977 PPP4R3CPQ6ZMV5 832 aa9.76□□□□□ -0.85
LINC00649-204ENST00000593977 DMRT2Q9Y5R5 561 aa9.74□□□□□ -0.85
LINC00649-204ENST00000593977 SLC4A1APQ9BWU0 796 aaKnown RBP9.73□□□□□ -0.85
LINC00649-204ENST00000593977 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
LINC00649-204ENST00000593977 CSRNP3Q8WYN3 585 aa9.67□□□□□ -0.86
LINC00649-204ENST00000593977 MAPK8IP2Q13387 824 aaPredicted RBP9.65□□□□□ -0.86
LINC00649-204ENST00000593977 SCAF1Q9H7N4 1312 aaKnown RBP9.52□□□□□ -0.89
LINC00649-204ENST00000593977 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
LINC00649-204ENST00000593977 DNAJC5BQ9UF47 199 aa9.48□□□□□ -0.89
LINC00649-204ENST00000593977 RNF39Q9H2S5 420 aa9.45□□□□□ -0.9
LINC00649-204ENST00000593977 SLC24A1O60721 1099 aa9.4□□□□□ -0.9
LINC00649-204ENST00000593977 CNKSR2Q8WXI2 1034 aa9.4□□□□□ -0.9
LINC00649-204ENST00000593977 DCAF8L1A6NGE4 600 aa9.39□□□□□ -0.91
LINC00649-204ENST00000593977 C1QBPQ07021 282 aaKnown RBP9.32□□□□□ -0.92
LINC00649-204ENST00000593977 ZBTB22O15209 634 aa9.29□□□□□ -0.92
LINC00649-204ENST00000593977 POTEHQ6S545 545 aa9.26□□□□□ -0.93
LINC00649-204ENST00000593977 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
LINC00649-204ENST00000593977 ABCC9O60706 1549 aa9.25□□□□□ -0.93
LINC00649-204ENST00000593977 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
LINC00649-204ENST00000593977 HOXD11P31277 338 aaPredicted RBP9.14□□□□□ -0.95
LINC00649-204ENST00000593977 RNF216Q9NWF9 866 aaPredicted RBP9.1□□□□□ -0.95
LINC00649-204ENST00000593977 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
LINC00649-204ENST00000593977 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
LINC00649-204ENST00000593977 ATXN8OSP0DMR3 200 aa8.85□□□□□ -0.99
LINC00649-204ENST00000593977 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
LINC00649-204ENST00000593977 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
LINC00649-204ENST00000593977 MYCNP04198 464 aaPredicted RBP8.81□□□□□ -1
LINC00649-204ENST00000593977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00649-204ENST00000593977 FKBP8Q14318 412 aa8.71□□□□□ -1.02
LINC00649-204ENST00000593977 DSG3P32926 999 aa8.63□□□□□ -1.03
LINC00649-204ENST00000593977 CAPN15O75808 1086 aa8.55□□□□□ -1.04
LINC00649-204ENST00000593977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.53□□□□□ -1.04
LINC00649-204ENST00000593977 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
LINC00649-204ENST00000593977 PABPN1Q86U42 306 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC00649-204ENST00000593977 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
LINC00649-204ENST00000593977 SPINK5Q9NQ38 1064 aaPredicted RBP8.5□□□□□ -1.05
LINC00649-204ENST00000593977 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
LINC00649-204ENST00000593977 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
LINC00649-204ENST00000593977 U3KPZ7 1027 aaPredicted RBP8.43□□□□□ -1.06
LINC00649-204ENST00000593977 CCDC180Q9P1Z9 1646 aa8.43□□□□□ -1.06
LINC00649-204ENST00000593977 CECR2Q9BXF3 1484 aa8.42□□□□□ -1.06
LINC00649-204ENST00000593977 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
LINC00649-204ENST00000593977 SP7Q8TDD2 431 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-204ENST00000593977 CHRDL2Q6WN34 429 aa8.35□□□□□ -1.07
LINC00649-204ENST00000593977 APLP2Q06481 763 aa8.33□□□□□ -1.08
LINC00649-204ENST00000593977 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-204ENST00000593977 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
LINC00649-204ENST00000593977 RBM42Q9BTD8 480 aaKnown RBP8.31□□□□□ -1.08
LINC00649-204ENST00000593977 CC2D2AQ9P2K1 1620 aa8.29□□□□□ -1.08
LINC00649-204ENST00000593977 CUX2O14529 1486 aa8.28□□□□□ -1.08
LINC00649-204ENST00000593977 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
LINC00649-204ENST00000593977 ABCB7O75027 752 aa8.26□□□□□ -1.09
LINC00649-204ENST00000593977 TRHP20396 242 aaPredicted RBP8.25□□□□□ -1.09
LINC00649-204ENST00000593977 SPDYE4A6NLX3 237 aa8.24□□□□□ -1.09
LINC00649-204ENST00000593977 PRKCSHP14314 528 aaPredicted RBP8.23□□□□□ -1.09
LINC00649-204ENST00000593977 NACADO15069 1562 aa8.2□□□□□ -1.1
LINC00649-204ENST00000593977 PROM2Q8N271 834 aa8.19□□□□□ -1.1
LINC00649-204ENST00000593977 UNC13AQ9UPW8 1703 aa8.19□□□□□ -1.1
LINC00649-204ENST00000593977 VASPP50552 380 aaPredicted RBP8.16□□□□□ -1.1
LINC00649-204ENST00000593977 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
LINC00649-204ENST00000593977 FBLN2P98095 1184 aa8.15□□□□□ -1.1
LINC00649-204ENST00000593977 MKRN4PQ13434 485 aaPredicted RBP8.15□□□□□ -1.1
LINC00649-204ENST00000593977 DAXXQ9UER7 740 aaPredicted RBP8.13□□□□□ -1.11
LINC00649-204ENST00000593977 EIF4G1Q04637 1599 aaKnown RBP8.09□□□□□ -1.11
LINC00649-204ENST00000593977 IFNLR1Q8IU57 520 aaPredicted RBP8.07□□□□□ -1.12
LINC00649-204ENST00000593977 TAOK2Q9UL54 1235 aa8.06□□□□□ -1.12
LINC00649-204ENST00000593977 HAX1O00165 279 aa8.05□□□□□ -1.12
LINC00649-204ENST00000593977 BCANQ96GW7 911 aa8.05□□□□□ -1.12
LINC00649-204ENST00000593977 SHROOM4Q9ULL8 1493 aa8.04□□□□□ -1.12
LINC00649-204ENST00000593977 DCAF8L2P0C7V8 631 aa8.03□□□□□ -1.12
LINC00649-204ENST00000593977 ILDR1Q86SU0 546 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-204ENST00000593977 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
LINC00649-204ENST00000593977 POLA2Q14181 598 aa8.02□□□□□ -1.13
LINC00649-204ENST00000593977 ERCC6Q03468 1493 aa8□□□□□ -1.13
LINC00649-204ENST00000593977 PKD2Q13563 968 aa8□□□□□ -1.13
LINC00649-204ENST00000593977 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
LINC00649-204ENST00000593977 PIP4P2Q8N4L2 257 aa7.98□□□□□ -1.13
LINC00649-204ENST00000593977 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
LINC00649-204ENST00000593977 AKT1S1Q96B36 256 aa7.96□□□□□ -1.14
LINC00649-204ENST00000593977 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
LINC00649-204ENST00000593977 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
LINC00649-204ENST00000593977 SPOCK2Q92563 424 aa7.91□□□□□ -1.14
LINC00649-204ENST00000593977 PLSCR2Q9NRY7 297 aa7.91□□□□□ -1.14
LINC00649-204ENST00000593977 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.91□□□□□ -1.14
LINC00649-204ENST00000593977 KLHL34Q8N239 644 aa7.9□□□□□ -1.14
LINC00649-204ENST00000593977 ARXQ96QS3 562 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms