RNA–Protein interactions for RNA: ENST00000504263.1

PCAT4-201, prostate cancer associated transcript 4, humanhuman

TSL 1 (best) BASIC

Gene PCAT4, Length 2,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT4-201ENST00000504263 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
PCAT4-201ENST00000504263 AEBP2Q6ZN18 517 aaPredicted RBP12.85□□□□□ -0.35
PCAT4-201ENST00000504263 CHIC1Q5VXU3 224 aa12.34□□□□□ -0.43
PCAT4-201ENST00000504263 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
PCAT4-201ENST00000504263 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
PCAT4-201ENST00000504263 MSH5O43196 834 aa10.88□□□□□ -0.67
PCAT4-201ENST00000504263 FOXD1Q16676 465 aa10.69□□□□□ -0.7
PCAT4-201ENST00000504263 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
PCAT4-201ENST00000504263 POTEHQ6S545 545 aa9.95□□□□□ -0.82
PCAT4-201ENST00000504263 PIAS4Q8N2W9 510 aaPredicted RBP9.71□□□□□ -0.86
PCAT4-201ENST00000504263 PPP6R1Q9UPN7 881 aa9.16□□□□□ -0.94
PCAT4-201ENST00000504263 ADRA2BP18089 450 aa9.07□□□□□ -0.96
PCAT4-201ENST00000504263 RNF39Q9H2S5 420 aa8.97□□□□□ -0.97
PCAT4-201ENST00000504263 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.99
PCAT4-201ENST00000504263 PLSCR2Q9NRY7 297 aa8.89□□□□□ -0.99
PCAT4-201ENST00000504263 DMRT2Q9Y5R5 561 aa8.84□□□□□ -0.99
PCAT4-201ENST00000504263 PLPPR3Q6T4P5 718 aa8.77□□□□□ -1
PCAT4-201ENST00000504263 SP7Q8TDD2 431 aaPredicted RBP8.59□□□□□ -1.03
PCAT4-201ENST00000504263 MAPK8IP2Q13387 824 aaPredicted RBP8.57□□□□□ -1.04
PCAT4-201ENST00000504263 DCAF8L1A6NGE4 600 aa8.48□□□□□ -1.05
PCAT4-201ENST00000504263 SCAF1Q9H7N4 1312 aaKnown RBP8.32□□□□□ -1.08
PCAT4-201ENST00000504263 DNAJC5BQ9UF47 199 aa8.17□□□□□ -1.1
PCAT4-201ENST00000504263 HOXD11P31277 338 aaPredicted RBP8.05□□□□□ -1.12
PCAT4-201ENST00000504263 LHX8Q68G74 356 aa8.02□□□□□ -1.12
PCAT4-201ENST00000504263 CHRDL2Q6WN34 429 aa8.02□□□□□ -1.13
PCAT4-201ENST00000504263 PCDH10Q9P2E7 1040 aa7.87□□□□□ -1.15
PCAT4-201ENST00000504263 DSG3P32926 999 aa7.86□□□□□ -1.15
PCAT4-201ENST00000504263 RBM42Q9BTD8 480 aaKnown RBP7.8□□□□□ -1.16
PCAT4-201ENST00000504263 HAX1O00165 279 aa7.77□□□□□ -1.17
PCAT4-201ENST00000504263 RNF216Q9NWF9 866 aaPredicted RBP7.77□□□□□ -1.17
PCAT4-201ENST00000504263 CNKSR2Q8WXI2 1034 aa7.64□□□□□ -1.19
PCAT4-201ENST00000504263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.64□□□□□ -1.19
PCAT4-201ENST00000504263 POTEMA6NI47 508 aa7.62□□□□□ -1.19
PCAT4-201ENST00000504263 PPP4R3CPQ6ZMV5 832 aa7.61□□□□□ -1.19
PCAT4-201ENST00000504263 CAPN15O75808 1086 aa7.6□□□□□ -1.19
PCAT4-201ENST00000504263 POTEGQ6S5H5 508 aa7.53□□□□□ -1.2
PCAT4-201ENST00000504263 SPINK5Q9NQ38 1064 aaPredicted RBP7.53□□□□□ -1.2
PCAT4-201ENST00000504263 PIP4P2Q8N4L2 257 aa7.46□□□□□ -1.22
PCAT4-201ENST00000504263 U3KPZ7 1027 aaPredicted RBP7.41□□□□□ -1.22
PCAT4-201ENST00000504263 EVX2Q03828 476 aa7.34□□□□□ -1.23
PCAT4-201ENST00000504263 ABCB7O75027 752 aa7.29□□□□□ -1.24
PCAT4-201ENST00000504263 GABBR2O75899 941 aa7.28□□□□□ -1.24
PCAT4-201ENST00000504263 TRHP20396 242 aaPredicted RBP7.23□□□□□ -1.25
PCAT4-201ENST00000504263 FXR2P51116 673 aaKnown RBP eCLIP7.23□□□□□ -1.25
PCAT4-201ENST00000504263 APLP2Q06481 763 aa7.21□□□□□ -1.25
PCAT4-201ENST00000504263 AKT1S1Q96B36 256 aa7.21□□□□□ -1.25
PCAT4-201ENST00000504263 ZNF219Q9P2Y4 722 aaPredicted RBP7.19□□□□□ -1.26
PCAT4-201ENST00000504263 C19orf67A6NJJ6 358 aa7.07□□□□□ -1.28
PCAT4-201ENST00000504263 NCBP3Q53F19 620 aaKnown RBP7.07□□□□□ -1.28
PCAT4-201ENST00000504263 OTUD5Q96G74 571 aa7.07□□□□□ -1.28
PCAT4-201ENST00000504263 CLCN6P51797 869 aa7.02□□□□□ -1.29
PCAT4-201ENST00000504263 REM2Q8IYK8 340 aaPredicted RBP7.02□□□□□ -1.29
PCAT4-201ENST00000504263 POTEIP0CG38 1075 aa6.99□□□□□ -1.29
PCAT4-201ENST00000504263 NPM3O75607 178 aaKnown RBP6.98□□□□□ -1.29
PCAT4-201ENST00000504263 CDAN1Q8IWY9 1227 aa6.93□□□□□ -1.3
PCAT4-201ENST00000504263 PITPNM1O00562 1244 aa6.92□□□□□ -1.3
PCAT4-201ENST00000504263 MMRN1Q13201 1228 aa6.91□□□□□ -1.3
PCAT4-201ENST00000504263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.89□□□□□ -1.31
PCAT4-201ENST00000504263 HNRNPUL2Q1KMD3 747 aaKnown RBP6.89□□□□□ -1.31
PCAT4-201ENST00000504263 SLC4A2P04920 1241 aa6.88□□□□□ -1.31
PCAT4-201ENST00000504263 DCBLD2Q96PD2 775 aa6.88□□□□□ -1.31
PCAT4-201ENST00000504263 POLA2Q14181 598 aa6.87□□□□□ -1.31
PCAT4-201ENST00000504263 NISCHQ9Y2I1 1504 aa6.85□□□□□ -1.31
PCAT4-201ENST00000504263 SAMD1Q6SPF0 538 aaPredicted RBP6.83□□□□□ -1.32
PCAT4-201ENST00000504263 FAM163AQ96GL9 167 aaPredicted RBP6.81□□□□□ -1.32
PCAT4-201ENST00000504263 LCE2DQ5TA82 110 aaPredicted RBP6.8□□□□□ -1.32
PCAT4-201ENST00000504263 MAMSTRQ6ZN01 415 aa6.79□□□□□ -1.32
PCAT4-201ENST00000504263 PRKAR2AP13861 404 aaKnown RBP6.77□□□□□ -1.33
PCAT4-201ENST00000504263 SPNS2Q8IVW8 549 aa6.75□□□□□ -1.33
PCAT4-201ENST00000504263 POTEB2H3BUK9 544 aa6.67□□□□□ -1.34
PCAT4-201ENST00000504263 OSCARQ8IYS5 282 aa6.67□□□□□ -1.34
PCAT4-201ENST00000504263 ZBTB12Q9Y330 459 aaPredicted RBP6.65□□□□□ -1.34
PCAT4-201ENST00000504263 SCUBE2Q9NQ36 999 aa6.57□□□□□ -1.36
PCAT4-201ENST00000504263 CD44P16070 742 aaKnown RBP6.49□□□□□ -1.37
PCAT4-201ENST00000504263 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
PCAT4-201ENST00000504263 SPDYE1Q8NFV5 336 aaPredicted RBP6.47□□□□□ -1.37
PCAT4-201ENST00000504263 CHADLQ6NUI6 762 aa6.46□□□□□ -1.37
PCAT4-201ENST00000504263 MYCNP04198 464 aaPredicted RBP6.46□□□□□ -1.38
PCAT4-201ENST00000504263 SPDYE2BA6NHP3 402 aa6.4□□□□□ -1.38
PCAT4-201ENST00000504263 SPDYE6P0CI01 402 aa6.4□□□□□ -1.38
PCAT4-201ENST00000504263 SPDYE2Q495Y8 402 aa6.4□□□□□ -1.38
PCAT4-201ENST00000504263 ATF5Q9Y2D1 282 aaPredicted RBP6.4□□□□□ -1.39
PCAT4-201ENST00000504263 ZNF579Q8NAF0 562 aaKnown RBP6.38□□□□□ -1.39
PCAT4-201ENST00000504263 C7P10643 843 aa6.36□□□□□ -1.39
PCAT4-201ENST00000504263 SLC39A7Q92504 469 aa6.35□□□□□ -1.39
PCAT4-201ENST00000504263 METRNQ9UJH8 293 aa6.33□□□□□ -1.4
PCAT4-201ENST00000504263 PELP1Q8IZL8 1130 aaKnown RBP6.32□□□□□ -1.4
PCAT4-201ENST00000504263 POTEJP0CG39 1038 aa6.32□□□□□ -1.4
PCAT4-201ENST00000504263 FARP1Q9Y4F1 1045 aaPredicted RBP6.3□□□□□ -1.4
PCAT4-201ENST00000504263 GALR2O43603 387 aaPredicted RBP6.29□□□□□ -1.4
PCAT4-201ENST00000504263 PRR29P0C7W0 189 aa6.28□□□□□ -1.4
PCAT4-201ENST00000504263 TMEM121BQ9BXQ6 578 aaPredicted RBP6.27□□□□□ -1.41
PCAT4-201ENST00000504263 ST18O60284 1047 aa6.24□□□□□ -1.41
PCAT4-201ENST00000504263 SSUH2Q9Y2M2 353 aa6.24□□□□□ -1.41
PCAT4-201ENST00000504263 MYT1Q01538 1121 aa6.24□□□□□ -1.41
PCAT4-201ENST00000504263 ZRANB1Q9UGI0 708 aa6.23□□□□□ -1.41
PCAT4-201ENST00000504263 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
PCAT4-201ENST00000504263 FBLN2P98095 1184 aa6.16□□□□□ -1.42
PCAT4-201ENST00000504263 KCNA4P22459 653 aa6.16□□□□□ -1.42
PCAT4-201ENST00000504263 RNF166Q96A37 237 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms