Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ASNSP1-201ENST00000518311 1939 ntBASIC1.43□□□□□ -2.18
USH2AO75445 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 CD2-201ENST00000369477 478 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 MIR195-201ENST00000385194 87 ntBASIC1.43□□□□□ -2.18
USH2AO75445 RN7SKP56-201ENST00000410513 331 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 AC015712.3-201ENST00000559380 164 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AC138761.3-201ENST00000579993 334 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AP004607.9-201ENST00000618202 316 ntBASIC1.43□□□□□ -2.18
USH2AO75445 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 MIR518E-201ENST00000385252 88 ntBASIC1.43□□□□□ -2.18
USH2AO75445 PRELID3BP7-201ENST00000503606 469 ntBASIC1.43□□□□□ -2.18
USH2AO75445 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AP000926.4-201ENST00000527351 454 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AC015922.4-201ENST00000612568 690 ntBASIC1.43□□□□□ -2.18
USH2AO75445 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
USH2AO75445 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 NSRP1P1-201ENST00000444067 1693 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AC006971.1-201ENST00000407916 4486 ntBASIC1.43□□□□□ -2.18
USH2AO75445 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
USH2AO75445 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 RN7SL585P-201ENST00000470538 280 ntBASIC1.43□□□□□ -2.18
USH2AO75445 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.43□□□□□ -2.18
USH2AO75445 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.43□□□□□ -2.18
USH2AO75445 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
USH2AO75445 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 OR10AB1P-202ENST00000641219 1686 ntBASIC1.43□□□□□ -2.18
USH2AO75445 MAPK10-373ENST00000641983 6772 ntBASIC1.43□□□□□ -2.18
USH2AO75445 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
USH2AO75445 SNORA3.2-201ENST00000408221 125 ntBASIC1.43□□□□□ -2.18
USH2AO75445 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
USH2AO75445 MRPL50P2-201ENST00000416821 482 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.43□□□□□ -2.18
USH2AO75445 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC128716.1-201ENST00000475129 166 ntBASIC1.43□□□□□ -2.18
USH2AO75445 RPL21P99-201ENST00000480369 423 ntBASIC1.43□□□□□ -2.18
USH2AO75445 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC1.43□□□□□ -2.18
USH2AO75445 NDUFA5P6-201ENST00000542110 379 ntBASIC1.43□□□□□ -2.18
USH2AO75445 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.43□□□□□ -2.18
USH2AO75445 MIR7702-201ENST00000621931 59 ntBASIC1.43□□□□□ -2.18
USH2AO75445 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
USH2AO75445 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
USH2AO75445 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 AC096638.2-201ENST00000434965 711 ntBASIC1.42□□□□□ -2.18
USH2AO75445 UBE2D3P1-201ENST00000436669 444 ntBASIC1.42□□□□□ -2.18
USH2AO75445 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC1.42□□□□□ -2.18
USH2AO75445 RPS3P1-201ENST00000456781 192 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC108729.3-201ENST00000513484 108 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AC010306.1-201ENST00000523223 1117 ntBASIC1.42□□□□□ -2.18
USH2AO75445 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USH2AO75445 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
USH2AO75445 AL365400.2-201ENST00000605604 902 ntBASIC1.42□□□□□ -2.18
USH2AO75445 CYCSP41-201ENST00000616920 296 ntBASIC1.42□□□□□ -2.18
USH2AO75445 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC1.42□□□□□ -2.18
USH2AO75445 AC003985.2-201ENST00000562268 1669 ntBASIC1.42□□□□□ -2.18
USH2AO75445 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
USH2AO75445 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
USH2AO75445 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
USH2AO75445 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.42□□□□□ -2.18
USH2AO75445 AL353678.1-201ENST00000422735 741 ntBASIC1.42□□□□□ -2.18
USH2AO75445 NPM1P24-201ENST00000428039 894 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms