Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUBP1P53384 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUBP1P53384 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.45□□□□□ -1.22
NUBP1P53384 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUBP1P53384 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC7.45□□□□□ -1.22
NUBP1P53384 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
NUBP1P53384 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
NUBP1P53384 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
NUBP1P53384 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 KCNJ15-207ENST00000398934 2815 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
NUBP1P53384 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 DPPA2P3-201ENST00000411853 655 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AL133482.1-201ENST00000415988 498 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AL390729.2-201ENST00000416137 156 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.44□□□□□ -1.22
NUBP1P53384 RPL18AP14-201ENST00000417685 526 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AC016712.1-201ENST00000431088 378 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.44□□□□□ -1.22
NUBP1P53384 Z82188.1-201ENST00000436709 154 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 CYCSP12-201ENST00000437729 300 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 RN7SL184P-201ENST00000488308 297 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 IGLV1-62-201ENST00000518003 441 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 ATP5F1P5-201ENST00000526403 760 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 EIF4A2P5-201ENST00000529914 499 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AC005363.1-201ENST00000530779 351 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.44□□□□□ -1.22
NUBP1P53384 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.44□□□□□ -1.22
NUBP1P53384 TRAV37-201ENST00000553906 342 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 AC119403.2-201ENST00000590960 598 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 7SK.12-201ENST00000612820 244 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 MIR8075-201ENST00000614354 80 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AC087894.3-201ENST00000623682 349 ntBASIC7.44□□□□□ -1.22
NUBP1P53384 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
NUBP1P53384 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.44□□□□□ -1.22
NUBP1P53384 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NUBP1P53384 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.43□□□□□ -1.22
NUBP1P53384 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NUBP1P53384 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
NUBP1P53384 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
NUBP1P53384 PPIAP24-201ENST00000328558 471 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 RN7SKP174-201ENST00000363803 330 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 RN7SKP191-201ENST00000364713 306 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 MIR301A-201ENST00000385261 86 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 AC024067.1-201ENST00000426199 223 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 AC245291.3-201ENST00000443400 292 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 SS18L2P1-201ENST00000445923 213 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 AK3P2-201ENST00000507976 429 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.43□□□□□ -1.22
NUBP1P53384 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.43□□□□□ -1.22
NUBP1P53384 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.43□□□□□ -1.22
NUBP1P53384 MIR5692C2-201ENST00000577959 77 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 B3GNTL1P2-201ENST00000603673 288 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 AC099506.2-201ENST00000623074 221 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 SNORA43.5-201ENST00000631270 138 ntBASIC7.43□□□□□ -1.22
NUBP1P53384 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.43□□□□□ -1.22
NUBP1P53384 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
NUBP1P53384 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms