Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 SGO1P1-201ENST00000603525 1447 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 DCAF13P3-201ENST00000561147 1334 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 RNA5SP307-201ENST00000362863 116 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLCNKAP51800 MIR16-1-201ENST00000385271 89 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 AC136624.1-201ENST00000400791 413 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.32□□□□□ -1.72
CLCNKAP51800 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 UBE2V1P3-201ENST00000439651 417 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AC079776.3-201ENST00000450665 370 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 DDX39BP2-208ENST00000453923 258 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.32□□□□□ -1.72
CLCNKAP51800 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AC015724.1-201ENST00000478577 156 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 GAPDHP39-201ENST00000481866 979 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 RN7SKP122-201ENST00000515923 296 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 MYL12AP1-201ENST00000518490 515 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 OR4C2P-201ENST00000530855 1064 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCNKAP51800 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 MIR6758-201ENST00000620653 63 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 AC067931.1-201ENST00000624190 671 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 AF001550.2-201ENST00000636643 217 ntBASIC4.32□□□□□ -1.72
CLCNKAP51800 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCNKAP51800 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCNKAP51800 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCNKAP51800 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCNKAP51800 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCNKAP51800 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLCNKAP51800 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCNKAP51800 AC025263.3-201ENST00000622965 1396 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCNKAP51800 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLCNKAP51800 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCNKAP51800 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLCNKAP51800 RPL32P3-201ENST00000359025 275 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 MIR331-201ENST00000362302 94 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 SNORA70.2-201ENST00000364506 135 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 RNA5SP372-201ENST00000390836 115 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCNKAP51800 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCNKAP51800 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCNKAP51800 P2RY10P2-201ENST00000416730 913 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCNKAP51800 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 RPL7P4-203ENST00000430239 730 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 RPS6P15-201ENST00000431996 751 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 GTF2IP7-202ENST00000436677 309 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 COX7BP2-201ENST00000437976 242 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCNKAP51800 AC104306.1-201ENST00000449702 371 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLCNKAP51800 RN7SL385P-201ENST00000468873 276 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 AC011979.1-201ENST00000472300 483 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 AC026979.1-201ENST00000492525 396 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCNKAP51800 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CLCNKAP51800 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 RN7SKP82-201ENST00000516786 223 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 COX6B1P6-201ENST00000522347 255 ntBASIC4.31□□□□□ -1.72
CLCNKAP51800 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms