Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GPC6Q9Y625 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GPC6Q9Y625 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 AC116351.2-201ENST00000606540 1585 ntBASIC18.22■□□□□ 0.51
GPC6Q9Y625 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GPC6Q9Y625 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
GPC6Q9Y625 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.21■□□□□ 0.51
GPC6Q9Y625 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 AC083880.1-201ENST00000608266 535 ntBASIC18.21■□□□□ 0.51
GPC6Q9Y625 HLA-B-256ENST00000639848 1089 ntBASIC18.21■□□□□ 0.51
GPC6Q9Y625 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GPC6Q9Y625 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.21■□□□□ 0.51
GPC6Q9Y625 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
GPC6Q9Y625 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GPC6Q9Y625 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.2■□□□□ 0.5
GPC6Q9Y625 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GPC6Q9Y625 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
GPC6Q9Y625 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms