Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 KRT18P16-201ENST00000510337 1294 ntBASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB11Q9Y5F2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 NUDT16P1-203ENST00000513809 620 ntBASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 AC145285.6-201ENST00000604632 637 ntBASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 MIR6786-201ENST00000616843 113 ntBASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHB11Q9Y5F2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB11Q9Y5F2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB11Q9Y5F2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHB11Q9Y5F2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
PCDHB11Q9Y5F2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
PCDHB11Q9Y5F2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHB11Q9Y5F2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 RBM17P1-201ENST00000453646 1190 ntBASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 KRT18P35-201ENST00000510488 1269 ntBASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms