Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB13Q9Y5F0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 AC005332.7-201ENST00000614046 2005 ntBASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 AP002982.1-201ENST00000492365 877 ntBASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.31■■□□□ 1
PCDHB13Q9Y5F0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHB13Q9Y5F0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AL135905.2-201ENST00000584934 1404 ntBASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 NIFKP9-201ENST00000419265 221 ntBASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AL160286.2-201ENST00000567150 934 ntBASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
PCDHB13Q9Y5F0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 KSR1P1-201ENST00000446298 240 ntBASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 AL445675.2-201ENST00000620291 557 ntBASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHB13Q9Y5F0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 AL032819.2-201ENST00000624543 2162 ntBASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDHB13Q9Y5F0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms