Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHTOPQ9Y3Y2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 PCDHA1-201ENST00000378133 2726 ntBASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 CICP6-201ENST00000457191 2729 ntBASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.84□□□□□ -0.19
CHTOPQ9Y3Y2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHTOPQ9Y3Y2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 EEF1DP3-203ENST00000566025 782 ntBASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 AL138724.1-201ENST00000606771 1088 ntBASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RARRES2P11-201ENST00000635158 484 ntBASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHTOPQ9Y3Y2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHTOPQ9Y3Y2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms