Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 AC092118.2-201ENST00000613495 667 ntBASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 AL356652.1-201ENST00000615962 565 ntBASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
R3HCC1Q9Y3T6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
R3HCC1Q9Y3T6 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 AC097658.1-201ENST00000475555 843 ntBASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 AC142086.2-201ENST00000569753 217 ntBASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.99■■□□□ 1.11
R3HCC1Q9Y3T6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 KRT17P1-201ENST00000399211 1546 ntBASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 AC069152.1-201ENST00000438030 544 ntBASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 AC105020.6-201ENST00000621523 1217 ntBASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.98■■□□□ 1.11
R3HCC1Q9Y3T6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms