Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.64■□□□□ 0.89
PRG3Q9Y2Y8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 YBX1P2-201ENST00000489612 999 ntBASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 AC141257.4-201ENST00000634557 245 ntBASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 AC136944.6-201ENST00000634818 245 ntBASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.63■□□□□ 0.89
PRG3Q9Y2Y8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 KRT8P11-201ENST00000409686 1436 ntBASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 COX11P1-201ENST00000489116 835 ntBASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.62■□□□□ 0.89
PRG3Q9Y2Y8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 TCF3P1-201ENST00000423021 1937 ntBASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 RNF152P1-201ENST00000397754 604 ntBASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 CA15P1-201ENST00000481698 905 ntBASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 AP003041.3-201ENST00000527151 707 ntBASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 LINC01238-205ENST00000567549 1107 ntBASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRG3Q9Y2Y8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.6■□□□□ 0.89
PRG3Q9Y2Y8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRG3Q9Y2Y8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRG3Q9Y2Y8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRG3Q9Y2Y8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms