Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 RN7SL850P-201ENST00000579959 291 ntBASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 AC005363.2-201ENST00000618631 242 ntBASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 AL031985.4-201ENST00000642138 673 ntBASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 TFP1-202ENST00000475455 1573 ntBASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA1Q9UND3 LINC01568-207ENST00000641790 1380 ntBASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 NAPSB-206ENST00000562112 1266 ntBASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 C1QL1P1-201ENST00000568105 661 ntBASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 AC145285.6-201ENST00000604632 637 ntBASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA1Q9UND3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 TUBB8P6-201ENST00000436895 1288 ntBASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 YBX1P10-201ENST00000444752 975 ntBASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA1Q9UND3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 FITM1-202ENST00000559294 800 ntBASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms