Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AC117947.1-201ENST00000427448 529 ntBASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AC007663.1-201ENST00000438948 1240 ntBASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 AL138966.2-201ENST00000621997 464 ntBASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
NLGN3Q9NZ94 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NLGN3Q9NZ94 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NLGN3Q9NZ94 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 TSPY17P-201ENST00000450329 467 ntBASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 AC092338.2-201ENST00000568827 1415 ntBASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLGN3Q9NZ94 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NLGN3Q9NZ94 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 RNF152P1-201ENST00000397754 604 ntBASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AL512604.3-201ENST00000569583 964 ntBASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 AL023803.3-201ENST00000615559 522 ntBASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.87■□□□□ 0.61
NLGN3Q9NZ94 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms