Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AP000525.1-201ENST00000608286 694 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AC011298.2-201ENST00000617989 482 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AC130371.2-201ENST00000619443 611 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 KRT8P41-201ENST00000533985 1514 ntBASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.62■□□□□ 0.57
SPHK1Q9NYA1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPHK1Q9NYA1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 Z82202.1-201ENST00000623446 1880 ntBASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 UNC93B2-201ENST00000285383 730 ntBASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SPHK1Q9NYA1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 AL390955.1-201ENST00000428694 934 ntBASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPHK1Q9NYA1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.58■□□□□ 0.57
SPHK1Q9NYA1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPHK1Q9NYA1 KRT8P9-201ENST00000558927 1449 ntBASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPHK1Q9NYA1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms