Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.67■□□□□ 0.58
NDE1Q9NXR1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NDE1Q9NXR1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 TEX21P-204ENST00000641479 1693 ntBASIC18.66■□□□□ 0.58
NDE1Q9NXR1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 LINC02228-203ENST00000641970 1355 ntBASIC18.66■□□□□ 0.58
NDE1Q9NXR1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NDE1Q9NXR1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms