Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 ZNF815P-204ENST00000434898 1737 ntBASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 AC093484.2-201ENST00000580996 2166 ntBASIC18.68■□□□□ 0.58
CUEDC1Q9NWM3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 AC012618.2-201ENST00000428058 849 ntBASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CUEDC1Q9NWM3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 AC116562.4-201ENST00000641316 2276 ntBASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 AP002982.1-201ENST00000492365 877 ntBASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 AF186192.3-201ENST00000583427 947 ntBASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CUEDC1Q9NWM3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 NIFKP9-201ENST00000419265 221 ntBASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 AC104417.2-201ENST00000562989 1793 ntBASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CUEDC1Q9NWM3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CUEDC1Q9NWM3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CUEDC1Q9NWM3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CUEDC1Q9NWM3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms