Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 PRKY-204ENST00000533551 1019 ntBASIC22.09■■□□□ 1.13
RNF216Q9NWF9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
RNF216Q9NWF9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC006128.1-201ENST00000624704 1661 ntBASIC22.08■■□□□ 1.13
RNF216Q9NWF9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC233702.5-201ENST00000584107 538 ntBASIC22.08■■□□□ 1.13
RNF216Q9NWF9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC011458.1-201ENST00000604034 617 ntBASIC22.08■■□□□ 1.13
RNF216Q9NWF9 AC124016.1-201ENST00000609552 612 ntBASIC22.08■■□□□ 1.13
RNF216Q9NWF9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF216Q9NWF9 PLK5-205ENST00000642079 1969 ntBASIC22.08■■□□□ 1.12
RNF216Q9NWF9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF216Q9NWF9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 RPS2P55-201ENST00000397318 883 ntBASIC22.07■■□□□ 1.12
RNF216Q9NWF9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 AC107956.1-201ENST00000494359 873 ntBASIC22.07■■□□□ 1.12
RNF216Q9NWF9 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 AC018754.1-201ENST00000607486 925 ntBASIC22.07■■□□□ 1.12
RNF216Q9NWF9 AC005066.1-201ENST00000613582 1007 ntBASIC22.07■■□□□ 1.12
RNF216Q9NWF9 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RNF216Q9NWF9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF216Q9NWF9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms