Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ABCF3Q9NUQ8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 AC135050.7-201ENST00000624508 2218 ntBASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 GUSBP6-202ENST00000438529 1198 ntBASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 AC104771.1-201ENST00000603335 964 ntBASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ABCF3Q9NUQ8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ABCF3Q9NUQ8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 AC098934.4-201ENST00000564127 592 ntBASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ABCF3Q9NUQ8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 AP000997.3-201ENST00000623333 2250 ntBASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 AC079598.2-202ENST00000546624 1451 ntBASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ABCF3Q9NUQ8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 AC020763.4-201ENST00000623414 4170 ntBASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 DUSP5P2-201ENST00000426873 1033 ntBASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ABCF3Q9NUQ8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 ID1-201ENST00000376105 1233 ntBASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ABCF3Q9NUQ8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms