Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 SLC25A3P1-201ENST00000443844 931 ntBASIC19.92■□□□□ 0.78
VPS45Q9NRW7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 AC073508.3-201ENST00000619697 1419 ntBASIC19.92■□□□□ 0.78
VPS45Q9NRW7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 FITM1-202ENST00000559294 800 ntBASIC19.91■□□□□ 0.78
VPS45Q9NRW7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS45Q9NRW7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 AC010947.1-201ENST00000623454 693 ntBASIC19.9■□□□□ 0.78
VPS45Q9NRW7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS45Q9NRW7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
VPS45Q9NRW7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
VPS45Q9NRW7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 CYP2D8P-201ENST00000433633 1490 ntBASIC19.89■□□□□ 0.77
VPS45Q9NRW7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS45Q9NRW7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 AL158211.5-201ENST00000623583 2518 ntBASIC19.88■□□□□ 0.77
VPS45Q9NRW7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VPS45Q9NRW7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms