Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KLHL1Q9NR64 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 FAM197Y1-201ENST00000421178 764 ntBASIC18.15■□□□□ 0.5
KLHL1Q9NR64 AL355075.4-201ENST00000554988 638 ntBASIC18.15■□□□□ 0.5
KLHL1Q9NR64 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 CD177P1-201ENST00000606252 935 ntBASIC18.15■□□□□ 0.5
KLHL1Q9NR64 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 AC026471.5-201ENST00000615068 467 ntBASIC18.15■□□□□ 0.5
KLHL1Q9NR64 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.15■□□□□ 0.5
KLHL1Q9NR64 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
KLHL1Q9NR64 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KLHL1Q9NR64 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 AL353807.1-201ENST00000427475 662 ntBASIC18.14■□□□□ 0.49
KLHL1Q9NR64 AL355355.2-201ENST00000442321 338 ntBASIC18.14■□□□□ 0.49
KLHL1Q9NR64 AP002982.1-201ENST00000492365 877 ntBASIC18.14■□□□□ 0.49
KLHL1Q9NR64 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KLHL1Q9NR64 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 AP003071.4-201ENST00000562276 1284 ntBASIC18.13■□□□□ 0.49
KLHL1Q9NR64 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
KLHL1Q9NR64 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms