Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 UBE2SP1-201ENST00000450587 669 ntBASIC20.35■□□□□ 0.85
GDF3Q9NR23 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 CYP21A1P-202ENST00000354927 1481 ntBASIC20.35■□□□□ 0.85
GDF3Q9NR23 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
GDF3Q9NR23 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GDF3Q9NR23 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 KRT17P3-201ENST00000420566 1262 ntBASIC20.34■□□□□ 0.85
GDF3Q9NR23 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 AC135050.7-201ENST00000624508 2218 ntBASIC20.34■□□□□ 0.85
GDF3Q9NR23 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GDF3Q9NR23 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.34■□□□□ 0.85
GDF3Q9NR23 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GDF3Q9NR23 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.33■□□□□ 0.85
GDF3Q9NR23 AL359736.2-201ENST00000621992 437 ntBASIC20.33■□□□□ 0.85
GDF3Q9NR23 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
GDF3Q9NR23 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF3Q9NR23 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
GDF3Q9NR23 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
GDF3Q9NR23 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GDF3Q9NR23 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF3Q9NR23 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GDF3Q9NR23 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 AL390961.4-201ENST00000623958 2535 ntBASIC20.32■□□□□ 0.84
GDF3Q9NR23 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 AL596275.1-201ENST00000423464 877 ntBASIC20.32■□□□□ 0.84
GDF3Q9NR23 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 AC008550.1-201ENST00000511500 884 ntBASIC20.32■□□□□ 0.84
GDF3Q9NR23 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 KRT8P20-201ENST00000423953 1409 ntBASIC20.32■□□□□ 0.84
GDF3Q9NR23 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GDF3Q9NR23 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.32■□□□□ 0.84
GDF3Q9NR23 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms