Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 FAM197Y1-201ENST00000421178 764 ntBASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 MIR4497-201ENST00000583208 89 ntBASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 CR392000.1-201ENST00000624770 1228 ntBASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 AC012183.1-201ENST00000625197 499 ntBASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRDM9Q9NQV7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 AL596275.1-201ENST00000423464 877 ntBASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 HLA-A-209ENST00000638375 975 ntBASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRDM9Q9NQV7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 TSPY7P-201ENST00000431358 1114 ntBASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 MIR4785-201ENST00000585005 73 ntBASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 KRT17P2-201ENST00000300992 1314 ntBASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRDM9Q9NQV7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 AC131212.4-201ENST00000623606 975 ntBASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 AL031985.4-201ENST00000642138 673 ntBASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRDM9Q9NQV7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRDM9Q9NQV7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms