Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
IFT46Q9NQC8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 HLA-G-202ENST00000376815 851 ntBASIC16.61■□□□□ 0.25
IFT46Q9NQC8 HLA-G-203ENST00000376818 1127 ntBASIC16.61■□□□□ 0.25
IFT46Q9NQC8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT46Q9NQC8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 PHGDH-210ENST00000641115 1638 ntBASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 SUDS3P1-201ENST00000505831 966 ntBASIC16.6■□□□□ 0.25
IFT46Q9NQC8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 AC142381.2-201ENST00000566120 298 ntBASIC16.6■□□□□ 0.25
IFT46Q9NQC8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CROCCP3-202ENST00000420820 1947 ntBASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.6■□□□□ 0.25
IFT46Q9NQC8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 AC012313.1-201ENST00000593393 3059 ntBASIC16.59■□□□□ 0.25
IFT46Q9NQC8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.59■□□□□ 0.25
IFT46Q9NQC8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms