Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SND1-IT1Q9HBX3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 KRT8P17-201ENST00000453110 1448 ntBASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 AP001271.2-201ENST00000624018 1556 ntBASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 FER1L4-210ENST00000615531 5998 ntBASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.92□□□□□ -0.34
SND1-IT1Q9HBX3 PTBP1P-201ENST00000554374 1601 ntBASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
SND1-IT1Q9HBX3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms