Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 SOX15-203ENST00000570788 1093 ntBASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRTM1Q9HBL6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 KRT18P16-201ENST00000510337 1294 ntBASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 AL121829.2-201ENST00000620908 328 ntBASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRTM1Q9HBL6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 AL109923.1-201ENST00000618799 583 ntBASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRTM1Q9HBL6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.52■□□□□ 0.56
LRTM1Q9HBL6 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms