Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 AC145285.6-201ENST00000604632 637 ntBASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 KRT8P9-201ENST00000558927 1449 ntBASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 RCC2P6-201ENST00000526625 1557 ntBASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 Z85996.1-201ENST00000494644 937 ntBASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6V0A4Q9HBG4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.45■■□□□ 1.03
ATP6V0A4Q9HBG4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC011506.1-201ENST00000474329 610 ntBASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 RN7SL850P-201ENST00000579959 291 ntBASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC005363.2-201ENST00000618631 242 ntBASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AC125437.2-201ENST00000625180 2167 ntBASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6V0A4Q9HBG4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.44■■□□□ 1.02
ATP6V0A4Q9HBG4 TREX1-205ENST00000625293 1783 ntBASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 AC004951.3-201ENST00000418645 1148 ntBASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 LINC01568-207ENST00000641790 1380 ntBASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 ZNF815P-204ENST00000434898 1737 ntBASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATP6V0A4Q9HBG4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP6V0A4Q9HBG4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP6V0A4Q9HBG4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
ATP6V0A4Q9HBG4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATP6V0A4Q9HBG4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATP6V0A4Q9HBG4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms