Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
POLR1BQ9H9Y6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
POLR1BQ9H9Y6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 AL162377.1-201ENST00000618844 1793 ntBASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 AL137013.1-201ENST00000432946 1228 ntBASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 KRT18P57-201ENST00000443599 1254 ntBASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLR1BQ9H9Y6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 AL512408.1-201ENST00000569378 2000 ntBASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 KSR1P1-201ENST00000446298 240 ntBASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 FITM1-202ENST00000559294 800 ntBASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 AP000974.1-201ENST00000623909 2387 ntBASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLR1BQ9H9Y6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 AC099778.1-201ENST00000568593 1911 ntBASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 TERF1P1-201ENST00000311003 1181 ntBASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLR1BQ9H9Y6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms