Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 LINC01465-201ENST00000408887 1940 ntBASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP13A3Q9H7F0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ATP13A3Q9H7F0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.52■□□□□ 0.71
ATP13A3Q9H7F0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATP13A3Q9H7F0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 AC116562.2-201ENST00000507042 360 ntBASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 MIR6786-201ENST00000616843 113 ntBASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATP13A3Q9H7F0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 REXO1L10P-201ENST00000615707 1290 ntBASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 REXO1L12P-201ENST00000622156 912 ntBASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATP13A3Q9H7F0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 Z85996.1-201ENST00000494644 937 ntBASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 AC104417.2-201ENST00000562989 1793 ntBASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 RCC2P6-201ENST00000526625 1557 ntBASIC19.49■□□□□ 0.71
ATP13A3Q9H7F0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ATP13A3Q9H7F0 AC004951.3-201ENST00000418645 1148 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms