Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 AC104581.1-202ENST00000635932 2618 ntBASIC19.41■□□□□ 0.7
VPS11Q9H270 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 AC141586.3-201ENST00000562166 1838 ntBASIC19.41■□□□□ 0.7
VPS11Q9H270 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.4■□□□□ 0.7
VPS11Q9H270 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS11Q9H270 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VPS11Q9H270 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS11Q9H270 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
VPS11Q9H270 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.4■□□□□ 0.7
VPS11Q9H270 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 AC022517.1-201ENST00000592429 346 ntBASIC19.4■□□□□ 0.7
VPS11Q9H270 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 MIR5787-201ENST00000611784 55 ntBASIC19.4■□□□□ 0.7
VPS11Q9H270 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VPS11Q9H270 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
VPS11Q9H270 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
VPS11Q9H270 AC135050.7-201ENST00000624508 2218 ntBASIC19.4■□□□□ 0.7
VPS11Q9H270 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.4■□□□□ 0.7
VPS11Q9H270 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VPS11Q9H270 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS11Q9H270 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.39■□□□□ 0.7
VPS11Q9H270 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS11Q9H270 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS11Q9H270 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VPS11Q9H270 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
VPS11Q9H270 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS11Q9H270 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS11Q9H270 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VPS11Q9H270 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS11Q9H270 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VPS11Q9H270 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.39■□□□□ 0.69
VPS11Q9H270 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 MKRN4P-201ENST00000444706 1521 ntBASIC19.39■□□□□ 0.69
VPS11Q9H270 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VPS11Q9H270 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VPS11Q9H270 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
VPS11Q9H270 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS11Q9H270 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VPS11Q9H270 AC133552.2-202ENST00000575694 574 ntBASIC19.38■□□□□ 0.69
VPS11Q9H270 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.38■□□□□ 0.69
VPS11Q9H270 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS11Q9H270 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
VPS11Q9H270 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.38■□□□□ 0.69
VPS11Q9H270 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.38■□□□□ 0.69
VPS11Q9H270 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VPS11Q9H270 AL390961.4-201ENST00000623958 2535 ntBASIC19.38■□□□□ 0.69
VPS11Q9H270 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS11Q9H270 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VPS11Q9H270 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms