Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.95■□□□□ 0.94
CDT1Q9H211 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDT1Q9H211 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
CDT1Q9H211 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDT1Q9H211 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDT1Q9H211 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CDT1Q9H211 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.94■□□□□ 0.94
CDT1Q9H211 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 NAPSB-206ENST00000562112 1266 ntBASIC20.94■□□□□ 0.94
CDT1Q9H211 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.94■□□□□ 0.94
CDT1Q9H211 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.94■□□□□ 0.94
CDT1Q9H211 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDT1Q9H211 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.94■□□□□ 0.94
CDT1Q9H211 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.94■□□□□ 0.94
CDT1Q9H211 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.94■□□□□ 0.94
CDT1Q9H211 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.94■□□□□ 0.94
CDT1Q9H211 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDT1Q9H211 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDT1Q9H211 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.93■□□□□ 0.94
CDT1Q9H211 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.93■□□□□ 0.94
CDT1Q9H211 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CDT1Q9H211 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.93■□□□□ 0.94
CDT1Q9H211 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.93■□□□□ 0.94
CDT1Q9H211 AC145285.6-201ENST00000604632 637 ntBASIC20.93■□□□□ 0.94
CDT1Q9H211 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 KRT8P11-201ENST00000409686 1436 ntBASIC20.93■□□□□ 0.94
CDT1Q9H211 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDT1Q9H211 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.93■□□□□ 0.94
CDT1Q9H211 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.92■□□□□ 0.94
CDT1Q9H211 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.92■□□□□ 0.94
CDT1Q9H211 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.92■□□□□ 0.94
CDT1Q9H211 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.92■□□□□ 0.94
CDT1Q9H211 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.92■□□□□ 0.94
CDT1Q9H211 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDT1Q9H211 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDT1Q9H211 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.91■□□□□ 0.94
CDT1Q9H211 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.91■□□□□ 0.94
CDT1Q9H211 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.91■□□□□ 0.94
CDT1Q9H211 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CDT1Q9H211 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.91■□□□□ 0.94
CDT1Q9H211 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.91■□□□□ 0.94
CDT1Q9H211 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.91■□□□□ 0.94
CDT1Q9H211 Z82202.1-201ENST00000623446 1880 ntBASIC20.91■□□□□ 0.94
CDT1Q9H211 LINC01568-207ENST00000641790 1380 ntBASIC20.91■□□□□ 0.94
CDT1Q9H211 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDT1Q9H211 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDT1Q9H211 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDT1Q9H211 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.9■□□□□ 0.94
CDT1Q9H211 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms