Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AL512353.2-201ENST00000448759 1962 ntBASIC19.57■□□□□ 0.72
PHACTR1Q9C0D0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 FEM1AP3-201ENST00000403722 1741 ntBASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 AC009113.1-201ENST00000570267 2443 ntBASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 AP006587.1-201ENST00000534129 1502 ntBASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 AC135050.7-201ENST00000624508 2218 ntBASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PHACTR1Q9C0D0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 BX276092.2-201ENST00000417668 665 ntBASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 AL137784.2-201ENST00000607332 1000 ntBASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 WIZP1-201ENST00000531444 2299 ntBASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PHACTR1Q9C0D0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 AC004911.1-201ENST00000416316 871 ntBASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 RPS2P52-201ENST00000469610 820 ntBASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 KRT18P16-201ENST00000510337 1294 ntBASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PHACTR1Q9C0D0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms