Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.01■□□□□ 0.31
VRK1Q99986 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.01■□□□□ 0.31
VRK1Q99986 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.01■□□□□ 0.31
VRK1Q99986 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.01■□□□□ 0.31
VRK1Q99986 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 KRT8P20-201ENST00000423953 1409 ntBASIC17.01■□□□□ 0.31
VRK1Q99986 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VRK1Q99986 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VRK1Q99986 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.01■□□□□ 0.31
VRK1Q99986 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VRK1Q99986 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17■□□□□ 0.31
VRK1Q99986 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 SNORA78-201ENST00000459373 127 ntBASIC17■□□□□ 0.31
VRK1Q99986 AC133681.1-201ENST00000465482 601 ntBASIC17■□□□□ 0.31
VRK1Q99986 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17■□□□□ 0.31
VRK1Q99986 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17■□□□□ 0.31
VRK1Q99986 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17■□□□□ 0.31
VRK1Q99986 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VRK1Q99986 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VRK1Q99986 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
VRK1Q99986 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.99■□□□□ 0.31
VRK1Q99986 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
VRK1Q99986 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.99■□□□□ 0.31
VRK1Q99986 MIR4497-201ENST00000583208 89 ntBASIC16.99■□□□□ 0.31
VRK1Q99986 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.99■□□□□ 0.31
VRK1Q99986 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 AL121829.2-201ENST00000620908 328 ntBASIC16.99■□□□□ 0.31
VRK1Q99986 AL121906.2-201ENST00000621597 723 ntBASIC16.99■□□□□ 0.31
VRK1Q99986 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VRK1Q99986 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VRK1Q99986 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.99■□□□□ 0.31
VRK1Q99986 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK1Q99986 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 DPP3P2-201ENST00000416030 1696 ntBASIC16.98■□□□□ 0.31
VRK1Q99986 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 NEFHP1-201ENST00000412845 2629 ntBASIC16.98■□□□□ 0.31
VRK1Q99986 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.98■□□□□ 0.31
VRK1Q99986 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK1Q99986 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VRK1Q99986 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.98■□□□□ 0.31
VRK1Q99986 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.98■□□□□ 0.31
VRK1Q99986 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.98■□□□□ 0.31
VRK1Q99986 AL031963.3-201ENST00000606441 850 ntBASIC16.98■□□□□ 0.31
VRK1Q99986 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VRK1Q99986 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms